Large Deviations for Random Trees and the Branching of RNA Secondary Structures

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dc.creatorBakhtin, Yuri
dc.creatorHeitsch, Christine E.
dc.date2008-03-27
dc.date.accessioned2026-07-07T09:28:50Z
dc.date.available2026-07-07T09:28:50Z
dc.descriptionWe give a Large Deviation Principle (LDP) with explicit rate function for the distribution of vertex degrees in plane trees, a combinatorial model of RNA secondary structures. We calculate the typical degree distributions based on nearest neighbor free energies, and compare our results with the branching configurations found in two sets of large RNA secondary structures. We find substantial agreement overall, with some interesting deviations which merit further study.
dc.description23 pages, 3 figures, 13 tables in the appendix
dc.identifierhttps://arxiv.org/abs/0803.3990
dc.identifierhttp://arxiv.org/abs/0803.3990
dc.identifier.urihttp://salesiana.dossiersoluciones.com/handle/123456789/157570
dc.subjectBiomolecules
dc.subjectQuantitative Methods
dc.titleLarge Deviations for Random Trees and the Branching of RNA Secondary Structures
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